CDS

Accession Number TCMCG057C48487
gbkey CDS
Protein Id XP_018457439.1
Location join(9519422..9520594,9520683..9520877,9520989..9521069,9521148..9521207,9521365..9521459,9521549..9521705,9521793..9521918,9522067..9522147,9522264..9522354,9522444..9522577,9522758..9522826,9522914..9523003,9523101..9523204,9523293..9523461,9523544..9523612)
Gene LOC108828296
GeneID 108828296
Organism Raphanus sativus

Protein

Length 897aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018601937.1
Definition PREDICTED: DNA topoisomerase 1-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA Topoisomerase I (eukaryota)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
KEGG_ko ko:K03163        [VIEW IN KEGG]
EC 5.99.1.2        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000228        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003916        [VIEW IN EMBL-EBI]
GO:0003917        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005657        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006260        [VIEW IN EMBL-EBI]
GO:0006265        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006338        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0031298        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043596        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCCACTGAGGCGTTTGTGAAACCTGTGGTGCCAAATGGTCATGACGGGTACGACGATGATGATGAAGATGAAATGCCTTTGGTTTTCAAGAGAAGCAGTAACAGTAACAATAATAATAATACATCATCTTCCTCTAATCGTCCAAGGCCTAACAATAACGCTCAGAGAAGTTCTTCTATCGGTTCCACCAAGTCCCCACCACCATCATCAAGGTCTCCTTTAACAAGCCCCAATAGATCAGCTTCTTCCGGAAGAAGTTCACTGATGAAACCGTCATCTTCTTCTGTGAAGTCCCCGCCAGTAGGGGAGGATAGAAGATCCGTTGCCTCTAAGGAGAGGAACGGTTTGGGAAAGGCTCCATCTGTGTCCAAAAGTGATGATGAGGATGATTCTGAGGATGATAAGCCTTTGAGTGCCAGGCTTAAAGGGGATACCAAACAAGGGAGCTCTTCCGGGCGTGGTAGCTCGCAGCTGCCAGTACAGAAGAGCAATGTGAGGCCTCAGGGAGTGAATGATAATAACAGTAGAAACAGAGATTCTGATGAGAAAGTTCAGACAAAGACCAACGTGGGTGCATCAAGTAGCAAGCCTATTCATAGTGACCAAAAGAGGCCCTTGGTTAACCATATCAATCGGAATGGTTTAAAGCCTAAGATTGAAGGGAATAGTTCTCAGGGACCTGCGAAGAGACCTCTTGAGAAGGGAAACTCTTCGAATCAATCTTCTGTTAAAAGGCCTAAGCCATCAGAGCCAGCTAGACCTGTGAAAATTGAGCAAGGCTCGCGTAGTACAGCTACTACGCCAGATAGGAAAGGAAATAATCTGGAGGACTCTAAGCCACTGAGAGTTAACCAAGTAGAAGATAACTCAGATGGTGATGATCATGTCCCTATTGCCTCGAGGATGAGCTCGAATAAGAAATCATCGTCCGCGAAGCCAAATGCTAGTATGATAGCTTCGTCATCCAGAACAATAGCTAAGAAGCCCAACAAATGGGTGAAAGATTCTAAGTATTCAAAGTCGTCGAGATCTTTACCTTCCGGAGATGGGCAAAAGAAATGGAAAACACTAGAGCACAATGGTGTTATTTTTCCACCTCCATATAAACGTCACGGTGTTAAGATATTGTATCAGGGAAAGCCTGTTGACTTGACTCCTGAACAAGAAGAGGTTGCCACTATGTTTGCGGTGATGAGAGAAACCGAATACTACAATAAACAGATGTTCAGAGATAACTTCTGGAATGATTGGCGGAAGATACTTGGAAAGAACCATGTGATTAAAAATCTTGATGATTGTGATTTCAGTCCCATATATGAATGGTATATGCAGGAGAAGGAGATAAAGAAACAAATGAGTGCAGAAGAGAAAAGGATTTTGAAAGAGGAGAAGTTAGCGCAAGAAGAGAAGTACATGTGGGCTGTTCTTGATGGCGTCAGAGAGAAGGTTGGAAATTTCAGAGTTGAACCCCCTGGCTTGTTTAGAGGCCGGGGAGAACATCCTAAGATGGGGAAACTGAAAAAGCGGATTCGTCCTTGTGATATTACAATCAACATCGGTAAAGAGGCACCTGTTCCAGAATGTCCTATCCCTGGTGAAAGATGGAAAGAAGTTAAGCATGACAATACTGTCACGTGGCTTGCTTTCTGGAATGATCCTATCAATCCAAAAGAGTTCAAGTATGTATTCTTGGCAGCTAGCAGTGCGTTAAAGGGGCTGAGCGACAAGGAGAAGTATGAGAAAGCGAGGAAGCTTAAGGACCGTATAGGGCATATTAGAGCAGCATACACCAAAGATTTTAGTAACAAGGATGTAACAAAGCGGCAAATAGCGGTTGCTACATATCTCATCGATAAGCTAGCCCTTAGGGCTGGAAATGAGAAGGACGATGATGAGGCAGATACTGTCGGTTGCTGTACATTGAAAGTAGGAAACGTGGATTGCATTCCTCCAAATAAGTTAAAGTTTGACTTCCTTGGTAAAGACTCGATTCAGTATGTAAACACAGTTGAAGTTGAGCCTCTTGTTTATAAGGCTATTGGGCAGTTCCAAGCGGGAAAATCGAAAACTGACGATCTCTTTGACGAGCTAGATACTTCAAAACTGAATGCTCATCTTAAGGAACTTATGCCTGCTCTCACAGCCAAAGTATTCCGTACATATAATGCATCCATCACATTGGATGATATGTTGAGTAAAGAAACGAGAGATGGAGATGTTCCTGAAAAAATTGTGGTTTATCAGCAAGCAAACAAGGAGGTCGCCATCATTTGTAACCATCAACGTACAGTCTCAAAATCTCACGGAGCACAAGTGGAGAAGCTGGCTTTGAAAATAGAAGAACTAAGGGAGCAAATAAAAGAGCTGGATATCGATCTCGACAGGGCTAAGAAAGGAAGAACACCATTAATGGGCTCTGATGGAAAGAGAAAGAGGAATTTGACACCAGAAGCTTTGGAGAAGAAGATAATGCAAACGAATGCCAAGATCGAGAAGATGGAAAGGGATATGCAGACCAAGGAAGATATGAAAACTGTAGCATTAGGCACGTCTAAGATCAATTACATGGATCCTAGGATCACTGTTGCATGGTGCAAAAGACATGATGTTCCCATTGAGAAGATATTTAACAAGTCTCTCCTGGCTAAGTTTGCTTGGGCAATGGACGTTGATCCTGAGTTCAGATTCTGA
Protein:  
MATEAFVKPVVPNGHDGYDDDDEDEMPLVFKRSSNSNNNNNTSSSSNRPRPNNNAQRSSSIGSTKSPPPSSRSPLTSPNRSASSGRSSLMKPSSSSVKSPPVGEDRRSVASKERNGLGKAPSVSKSDDEDDSEDDKPLSARLKGDTKQGSSSGRGSSQLPVQKSNVRPQGVNDNNSRNRDSDEKVQTKTNVGASSSKPIHSDQKRPLVNHINRNGLKPKIEGNSSQGPAKRPLEKGNSSNQSSVKRPKPSEPARPVKIEQGSRSTATTPDRKGNNLEDSKPLRVNQVEDNSDGDDHVPIASRMSSNKKSSSAKPNASMIASSSRTIAKKPNKWVKDSKYSKSSRSLPSGDGQKKWKTLEHNGVIFPPPYKRHGVKILYQGKPVDLTPEQEEVATMFAVMRETEYYNKQMFRDNFWNDWRKILGKNHVIKNLDDCDFSPIYEWYMQEKEIKKQMSAEEKRILKEEKLAQEEKYMWAVLDGVREKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKEAPVPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARKLKDRIGHIRAAYTKDFSNKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVDCIPPNKLKFDFLGKDSIQYVNTVEVEPLVYKAIGQFQAGKSKTDDLFDELDTSKLNAHLKELMPALTAKVFRTYNASITLDDMLSKETRDGDVPEKIVVYQQANKEVAIICNHQRTVSKSHGAQVEKLALKIEELREQIKELDIDLDRAKKGRTPLMGSDGKRKRNLTPEALEKKIMQTNAKIEKMERDMQTKEDMKTVALGTSKINYMDPRITVAWCKRHDVPIEKIFNKSLLAKFAWAMDVDPEFRF